FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12716748
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA106850.019.6753397
CTCAAAC124450.016.7185949
GCTCAAA142800.014.6211078
ATGGCTC148950.014.1624245
TGGCTCA156700.013.1863146
TCTGATG198800.010.3918561
GATGGCT223900.09.2609184
CCTCTAG16650.08.82093850-54
CTCGGGT50300.08.27260520-24
CTGATGG258350.07.8343222
GGGTGGG58050.07.466329625-29
TGATGGC315000.07.040283
GGTCCTC68450.06.35234945-49
ACACAGC77050.05.90537410-14
AACACGT51200.05.793397430-34
AACACAG82350.05.752614510-14
GGTGGGA76500.05.74091725-29
CTAGCAC15050.05.64474650-54
ACACGTT53750.05.571831735-39
AGGTCCT77050.05.54989445-49
Produced by FastQC (version 0.11.5)