FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22903935
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT148900.038.053834
AGTGGTA170400.033.544545
AGCAGTG173850.032.88182
GCAGTGG201550.028.291813
GTGGTAT224650.025.4113226
AAGCAGT266650.022.3092291
TGGTATC269650.021.3574817
GGTATCA279300.020.9546348
GTATCAA303050.019.146149
TCTTGGG167000.07.07893635-39
CAACGCA185750.06.82862410-14
GCAGAGT190850.06.5104515-19
AACGCAG203400.06.243149810-14
GTCTCAG66250.05.7220741
TCAACGC244550.05.51642910-14
ACGCAGA254600.05.16303115-19
CGCAGAG263450.05.142612515-19
Produced by FastQC (version 0.11.5)