FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16879448
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGAGG15850.06.99450850-54
ATCCAAC91300.05.99249653
TCTAGAG18500.05.681288250-54
TAATTGC104200.05.66504535
AATCTAG22100.05.60264645-49
GTAATAA121650.05.4351141
TATCCAA116450.05.3781682
ATCTAGA22600.05.160164445-49
ATAATTG133650.05.00923254
Produced by FastQC (version 0.11.5)