FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181228

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181228
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13735485
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA75950.035.5445565
CAGTGGT85300.032.2391784
GTATCAA112850.024.177279
GTGGTAT113950.024.0070536
AGCAGTG121450.022.954492
GGTATCA125300.021.7749798
TGGTATC128050.021.4767
GCAGTGG140850.019.6776623
AAGCAGT147850.019.011741
TCTTGGG94700.05.99064635-39
GCAGAGT104950.05.54248115-19
TATCAAC124900.05.17587210-14
CAACGCA121850.05.116369710-14
Produced by FastQC (version 0.11.5)