FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181230

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181230
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16975793
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA104200.034.060115
CAGTGGT108900.032.9867484
GTGGTAT150400.023.9804156
AGCAGTG156150.023.342532
GCAGTGG163700.022.3399333
GTATCAA167850.021.9591469
GGTATCA174350.020.8927388
TGGTATC178200.020.3605587
AAGCAGT210300.017.5898041
AGGGGGT63300.07.61970049
CCTAAAA88900.07.28995471
ATGCATG70500.07.23011971
TCTTGGG115300.06.58122935-39
GAGGGGG92800.05.7405118
GCAGAGT142750.05.54736815-19
CAACGCA146250.05.43425510-14
CTAAAAA136900.05.1565832
TATCAAC167550.05.03558610-14
Produced by FastQC (version 0.11.5)