FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16975793
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA131500.018.7792116
GGCTCAA133600.018.2150147
ATGGCTC135450.018.0721135
CTCAAAC144000.017.1491729
GATGGCT174300.014.4160834
TCTGATG174600.014.2181151
GCTCAAA196650.012.4114838
CCTCTAG16750.011.08921650-54
CTGATGG265250.09.8569362
CCTAAAA87800.09.3970441
TGATGGC292550.09.082053
CTCGGGT62150.08.64142720-24
CTCTAGG11150.08.52304950-54
AGGGGGT68500.07.6726239
CTAGCAC11700.07.507060550-54
ATGCATG73950.06.3190111
CTAAAAA133700.06.08748342
CTAGGAT15700.06.05299450-54
TCTAGGA16650.05.79410750-54
AATTCTC137250.05.71784168
Produced by FastQC (version 0.11.5)