FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12483697
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT74700.030.6467294
AGTGGTA79400.028.7419595
AGCAGTG104550.022.1165732
GTGGTAT111750.020.6148436
GCAGTGG119900.019.2736243
GTATCAA122200.018.734139
TGGTATC125800.018.3696987
GGTATCA133650.017.1830148
AAGCAGT143600.016.6279491
TCTTGGG82750.05.829019535-39
GCAGAGT96750.05.208668715-19
CAACGCA104550.05.136796510-14
Produced by FastQC (version 0.11.5)