FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17953108
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCCCA68050.07.6168489
GTATAGC76200.06.55109171
GTATAGA67850.05.65126371
CTCGCCA141350.05.6301041
GTATACG82900.05.32347061
AGCCCAA108650.05.30067549
ACTTTTG152250.05.29606638
GTGTAGA92000.05.26873731
ACACTAA33900.05.18149485-89
CACTAAT36150.05.177617585-89
GTTAGAC19800.00353485425.1154331
CGAGCCC114100.05.0477418
Produced by FastQC (version 0.11.5)