FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18856295
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA127700.032.4724665
CAGTGGT141400.029.4827584
AGCAGTG161200.026.3965742
GTATCAA175900.024.1467959
GTGGTAT179000.023.48736
GCAGTGG200050.021.3789733
GGTATCA201700.021.3079558
TGGTATC219800.019.6515527
AAGCAGT232100.018.841661
TCTTGGG157150.05.625978535-39
GCAGAGT171950.05.45933715-19
AACGCAG181400.05.38125710-14
CAACGCA188700.05.226488610-14
TATCAAC209700.05.053249410-14
Produced by FastQC (version 0.11.5)