FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181275

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181275
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15829846
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA123300.017.4369357
ATGGCTC129200.016.8075245
CTCAAAC135900.015.9258869
TGGCTCA138750.015.5989576
TCTGATG155100.013.5181441
GATGGCT171750.012.4342334
GCTCAAA189250.011.6643838
CCTCTAG13650.09.79888450-54
CTGATGG264350.08.1333682
CTCTAGG10150.07.65163250-54
CTCGGGT58300.07.350900720-24
TGATGGC313500.07.3166533
CTAGGAT12800.06.854033550-54
TCTAGGA13000.06.195423650-54
CTAGCAC10800.05.992597650-54
TCGGGTG88400.05.238502525-29
Produced by FastQC (version 0.11.5)