FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15165564
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAACG29350.015.7215884
TCTAAAC29450.015.6683093
ACGCTAA27900.015.4826558
CCTCTAA31100.014.4219941
CTCTAAA41000.011.60613252
CGCTAAA46600.09.8872439
AACGCTA57250.08.0483037
TAAACGC73900.06.52709775
AGAGCAC135300.06.11925368
GATCGGA129650.05.91462761
GAGCACA123450.05.8899489
Produced by FastQC (version 0.11.5)