FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16387506
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGACC6301.05501385E-106.3990536120-124
CGTTAGT13300.0099154485.95415269
CCTAGAC5654.002828E-65.3514214120-124
TCCTAGA9001.5097612E-105.2792196115-119
Produced by FastQC (version 0.11.5)