FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14882060
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT82950.036.190034
AGTGGTA84400.035.824175
AGCAGTG117700.026.2570782
GTGGTAT121350.024.975356
GCAGTGG127350.023.7421263
TGGTATC134100.022.7617867
GTATCAA138800.022.509699
GGTATCA138750.022.1027288
AAGCAGT162850.019.0078851
TCTTGGG89650.06.93838535-39
GCAGAGT107950.06.08201215-19
CAACGCA123300.05.803534510-14
AACGCAG145400.05.010549510-14
Produced by FastQC (version 0.11.5)