FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13040889
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACTA42300.051.0946128
TTAACCC52500.042.360092
TAACCCT56050.039.291643
TCACTAA63500.034.490079
AACCCTC64800.034.354564
CCTCACT66400.032.9837277
ACCCTCA70650.032.0197875
ATTAACC70700.031.1801591
CCCTCAC76900.029.0425426
CTAGATG20950.012.16761555-59
CTAGCCT12206.7684596E-910.0388367
TACTAGA26550.010.03363150-54
ACTAGAT26450.010.01712450-54
GACTAGC15202.7685019E-99.0055645
TTACTAG32350.08.59080750-54
ACTAGCC15302.9513103E-88.4757936
GGACTAG15352.799061E-77.97887134
CTATAGT44800.07.93939180-84
TGAGTCG45500.07.72238385-89
GTGAGTC45700.07.59405585-89
Produced by FastQC (version 0.11.5)