FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15711211
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA92000.029.7394815
CAGTGGT98850.027.4601124
AGCAGTG124600.022.7125572
GTGGTAT132950.020.687726
GTATCAA150050.018.3758689
GCAGTGG162800.017.337093
GGTATCA165200.017.0828828
TGGTATC165250.017.0362077
AAGCAGT185100.015.5075021
TCTTGGG98300.06.0349735-39
CAACGCA119950.05.26972110-14
Produced by FastQC (version 0.11.5)