FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15711211
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA126150.014.7815327
CTCAAAC133600.014.0645939
ATGGCTC133150.013.6809225
GCTCAAA173600.011.2804428
TGGCTCA177050.010.7360366
TCTGATG175850.010.327361
GATGGCT187750.09.8219544
CTGATGG250300.07.83182672
TGATGGC279550.07.06079863
CCTCTAG18600.06.11545850-54
CTCGGGT68000.05.844053720-24
CTCTAGG15400.05.14229350-54
Produced by FastQC (version 0.11.5)