FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14257247
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA88850.036.4611855
CAGTGGT92450.034.6520424
AGCAGTG124850.025.848382
GTGGTAT128700.025.0037256
GCAGTGG139850.022.7013573
GTATCAA147600.021.8995769
TGGTATC147650.021.8921597
GGTATCA152850.021.0060868
AAGCAGT160650.020.5284441
TCTTGGG99850.06.7343135-39
GCAGAGT111200.06.512890315-19
CAACGCA122150.06.082217710-14
AACGCAG147350.05.29608410-14
TATCAAC142050.05.159198810-14
Produced by FastQC (version 0.11.5)