FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20599281
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT112450.022.086994
AGTGGTA120650.020.4665055
AGCAGTG141800.017.6191942
GCAGTGG168650.014.8559473
GTGGTAT176500.014.5613086
GTATCAA203950.012.4249859
TGGTATC207150.012.4068117
GGTATCA208500.012.2574238
AAGCAGT207300.012.0947131
Produced by FastQC (version 0.11.5)