FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18558191
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA92600.024.1780265
CAGTGGT99800.022.4337234
GTGGTAT138550.016.8868376
AGCAGTG141450.016.1872432
TGGTATC164750.014.2013437
GTATCAA163200.014.1156649
GCAGTGG163400.014.0999823
GGTATCA176900.013.3073458
AAGCAGT180850.012.8994131
Produced by FastQC (version 0.11.5)