FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18558191
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC139350.014.982745
TGGCTCA143100.014.6403036
GGCTCAA143150.013.931247
CTCAAAC150750.013.4198269
TCTGATG187800.010.6872971
GATGGCT200750.010.2928574
GCTCAAA209300.09.9752358
CCTCTAG12050.07.64760150-54
CTGATGG304150.06.96021942
TGATGGC350300.06.4536083
CTCGGGT64800.06.31129220-24
CTCTAGG11200.06.04243750-54
TCTAGGA13050.05.51685850-54
CTAGCAC9953.6379788E-125.354401650-54
CTAGGAT13200.05.34508350-54
Produced by FastQC (version 0.11.5)