FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12867178
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA108000.014.5321537
CTCAAAC122950.013.0575019
GCTCAAA133250.012.0485538
ATGGCTC155150.010.5339175
TGGCTCA170600.09.3267236
TCTGATG176000.08.9964331
GATGGCT233200.07.3517744
CTGATGG238550.07.09961562
CCTCTAG13000.06.97759150-54
CTCGGGT52050.06.224080620-24
TGATGGC327800.05.7579093
GGGTGGG69000.05.237742425-29
GGTCCTC65250.05.22975845-49
Produced by FastQC (version 0.11.5)