FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16867684
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACATTA68150.010.6684089
CTAGCTA13450.010.59718825-29
ATCTAGC14750.09.76080625-29
TCTAGCT18150.08.17030625-29
TATCTAG19900.07.234768425-29
GGCCCTA25200.06.74148545-49
TACAATC117500.06.7397132
CAATCCA115600.06.53863574
CCACATT130700.06.16859878
ATACAAT132800.06.0071751
AATCCAC134650.05.45317655
CCCCTAA28300.05.4437346110-114
ACAATCC148050.05.39744573
Produced by FastQC (version 0.11.5)