FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16825798
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA112600.016.751647
TGGCTCA124250.015.412786
CTCAAAC128450.015.1888349
ATGGCTC131900.014.5190345
TCTGATG167750.011.9620961
GCTCAAA167500.011.3467958
GATGGCT202800.010.1533184
CTGATGG243750.08.7141952
TGATGGC285900.07.70588163
CCTCTAG15750.07.405073650-54
CTCGGGT54750.07.364508620-24
CTCTAGG13350.06.471350750-54
TCTAGGA17050.05.40481150-54
GGGTGGG93450.05.053858325-29
GGTCCTC82400.05.049967345-49
Produced by FastQC (version 0.11.5)