FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17689292
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT92500.025.8388844
AGTGGTA108000.022.1305265
AGCAGTG139000.017.7670142
GTGGTAT143550.016.8505276
GCAGTGG153050.015.8999273
TGGTATC182600.013.6017797
AAGCAGT186500.013.5971821
GTATCAA187150.013.3480259
GGTATCA190350.012.89670858
Produced by FastQC (version 0.11.5)