FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16587302
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT95800.023.6710364
AGTGGTA96250.023.2611855
AGCAGTG139400.016.3738632
GTGGTAT141850.016.0880036
GCAGTGG159350.014.4584743
GTATCAA163250.014.3318549
GGTATCA173900.013.3713468
TGGTATC169300.013.3519557
AAGCAGT184150.013.2207791
GTCCCTA31150.012.1682351
CCCTATA54350.07.55092053
TATAGAG76300.05.9441298
TCCCTAT79800.05.8649612
TATATAG91850.05.7215796
CAACTCT83750.05.2434519
Produced by FastQC (version 0.11.5)