FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16587302
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA115900.016.8958686
GGCTCAA119700.016.2996927
ATGGCTC120000.015.7788775
GTCCCTA28000.015.2669091
CTCAAAC134250.014.9083479
TCTGATG156050.013.09311
GATGGCT181700.010.8570794
GCTCAAA185500.010.6341558
GATCTAG7602.4776606E-510.4207513
CCTCTAG14050.08.30113450-54
CTGATGG261750.08.1428432
CCCTATA57050.07.95069033
TCTAGCC12951.557933E-57.7832315
CTCGGGT53650.07.488749520-24
CTCTAGG10100.07.27072250-54
TGATGGC298650.07.25644543
CTAGCCG14004.3810684E-57.19937946
ATCTAGC12909.847824E-46.69744064
TATAGAG76250.05.4762668
TCCCTAT80900.05.42940572
Produced by FastQC (version 0.11.5)