FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17648026
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA101050.038.7609565
CAGTGGT111300.035.2560164
GTGGTAT141300.027.770666
AGCAGTG144650.027.677942
GCAGTGG160600.025.0165083
GTATCAA165500.023.8817219
GGTATCA171750.023.054588
TGGTATC170050.023.0331947
AAGCAGT196700.020.7664131
TCTTGGG126750.06.679697535-39
GCAGAGT138350.06.4423115-19
CAACGCA150700.06.114974510-14
AACGCAG173100.05.28207510-14
TATCAAC179250.05.1892110-14
Produced by FastQC (version 0.11.5)