FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17648026
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA136350.018.2694937
ATGGCTC146950.016.7073975
CTCAAAC153200.016.6823779
TGGCTCA151850.016.4527596
GCTCAAA186350.013.7152768
TCTGATG192550.013.3141531
GATGGCT209550.012.1687284
CTGATGG295450.08.8543232
CCTCTAG16200.08.44341450-54
TGATGGC351550.07.74562453
CTCGGGT69250.07.630656720-24
CTCTAGG12000.06.959150350-54
CTAGCAC11150.06.198346650-54
TCTAGGA15350.05.90937650-54
CTAGGAT15000.05.66330850-54
GGGTGGG107750.05.345143325-29
AACACAG110800.05.133104310-14
Produced by FastQC (version 0.11.5)