FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17437919
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGGCTC112100.016.3133475
TGGCTCA119800.015.7453846
GGCTCAA126200.014.6619767
CTCAAAC146500.012.8267149
GATGGCT159750.011.5377954
TCTGATG154550.011.5304021
GCTCAAA238600.08.3281528
CTGATGG234650.08.040222
CCTCTAG13000.07.974985650-54
TGATGGC274300.07.3233043
CTCTAGG10650.06.35461250-54
CTCGGGT66050.05.8865620-24
CTAGGAT11400.05.431307350-54
Produced by FastQC (version 0.11.5)