FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181468

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181468
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12922055
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA67050.036.290055
CAGTGGT73800.033.263484
GTATCAA94250.026.580779
GTGGTAT99400.024.5517796
GGTATCA107650.023.2720628
TGGTATC109050.022.9072767
AGCAGTG109200.022.8245472
GCAGTGG132250.018.8887623
AAGCAGT138650.018.3820291
TCTTGGG77550.06.776902735-39
TATCAAC91950.06.059808310-14
GCAGAGT91150.05.92348915-19
CAACGCA98650.05.88176410-14
Produced by FastQC (version 0.11.5)