FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18260104
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCATG233400.06.75232271
GATCCTC161100.06.13109061
GATCATT117300.05.8819311
GATCCTG209300.05.82954171
GATCGGA206550.05.6961861
CCACTCA58500.05.65868859
GATCATA92900.05.6287391
GATCCTT119350.05.5983461
GATCATC291750.05.27739141
GATCACC223000.05.1457251
Produced by FastQC (version 0.11.5)