FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17088014
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTCA120200.018.2681856
ATGGCTC122200.017.4980285
GGCTCAA129850.016.7442257
CTCAAAC135300.016.654889
TCTGATG150100.014.2379221
GATGGCT172250.012.7065714
GCTCAAA185900.012.3538538
CCTCTAG11300.011.08578850-54
CTGATGG251550.08.9595752
CTCTAGG8950.08.848412550-54
TGATGGC279350.08.2216663
CTCGGGT59800.07.368670520-24
TCTAGGA11900.07.017893350-54
CTAGGAT11400.06.441559350-54
CTAGCAC9500.05.607946450-54
CTCTAGC11750.05.269341550-54
Produced by FastQC (version 0.11.5)