FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14958823
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA120950.019.6437287
CTCAAAC131100.017.9575219
ATGGCTC142300.016.3924125
TGGCTCA153950.015.6663526
GCTCAAA168100.014.5620568
TCTGATG180300.013.1255391
GATGGCT212350.011.7310484
CCTCTAG13550.09.4575850-54
CTGATGG279850.08.7507182
TGATGGC343900.07.4536663
CTCGGGT66500.07.44818920-24
CTCTAGG11250.06.78348150-54
AACACAG84450.06.001720410-14
CTAGCAC12350.05.82951450-54
GGGTGGG94250.05.668005525-29
CTAGGAT15000.05.56757450-54
GGTGGGA98000.05.553968425-29
GGTCCTC89450.05.520967545-49
ACACAGC92650.05.392831310-14
AAACACA104150.05.37802810-14
Produced by FastQC (version 0.11.5)