FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15380646
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA107300.035.4263955
CAGTGGT113400.033.4571464
GTGGTAT153950.024.8783666
AGCAGTG165450.023.107052
GCAGTGG174350.022.0101013
TGGTATC179800.021.5017877
GTATCAA189800.020.6344389
GGTATCA190100.020.5261338
AAGCAGT223950.017.4568371
TCTTGGG104750.07.45079735-39
GGGGGGG21101.6700142E-87.16561752
CAACGCA126950.06.91856810-14
AACGCAG146150.05.901291410-14
TCAACGC159250.05.705175410-14
GCAGAGT153150.05.650373515-19
CTTGGGG77950.05.338745635-39
TATCAAC171350.05.243479710-14
ACGCAGA179450.05.054948315-19
Produced by FastQC (version 0.11.5)