FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11027099
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA25350.012.1968729
CTAGCAC3500.00466444538.2994331
GCCACTC48400.07.42818368
GGCCTAA10700.07.257458775-79
CCGTTAA35500.06.8864714
AGCCACT54500.06.5967727
GTTAAAT39201.1823431E-105.68616966
TCCGTTA62500.05.40813
CGTTAAA43907.8216544E-115.40499835
AAGCCAC68050.05.1774056
Produced by FastQC (version 0.11.5)