FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12710930
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCTAG11250.010.49094860-64
GGCCTAG4950.09.30455995-99
AGCTAGA11500.07.75974160-64
TCGCTAG10300.07.406159140-144
CGCTAGC10350.06.814125140-144
GGCTAGT12200.06.60664385-89
AGGCTAG11550.06.35537185-89
CTAGTCC12050.05.972203790-94
AGCTAGG8102.764864E-105.508457760-64
GCTAGGC8957.1304385E-105.146124460-64
Produced by FastQC (version 0.11.5)