FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11232635
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA33400.012.5029937
CACTATA35600.011.528099
ACACTAT35700.011.2941178
AAACACT61400.07.03583056
CTAGCGA6656.184564E-116.27969995-99
CAAACAC73050.05.9137585
ACCAAAC82250.05.5148943
TAGCCCT43154.5474735E-115.50637342
Produced by FastQC (version 0.11.5)