FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11147112
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGACTC37550.08.4367518
GTTCCAA78000.07.47692251
CCAAATA80450.07.2492234
TGACTCC50350.06.43495569
TATCCAA84850.06.27931649
TCCAAAT93200.06.25751073
CTAGCTA6855.0895324E-95.675912490-94
TTTGACT65000.05.6492317
TAGCTAG7409.1858965E-105.643243390-94
Produced by FastQC (version 0.11.5)