FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14564201
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA113200.010.8120087
CTCAAAC143300.08.842169
GCTCAAA145650.08.7984468
ATGGCTC185550.07.25578645
ACACTAG14455.01079E-46.4770827
CTCTAGG14900.06.37757850-54
TGGCTCA223550.06.02241666
TAGACCC23204.6146542E-65.89606148
CCTCTAG18200.05.77496750-54
CTCGGGT52550.05.28809220-24
TCTGATG258450.05.24532561
GGGTGGG51350.05.1594925-29
TTAGACC23852.599151E-45.1317377
GATGGCT301900.05.0081234
Produced by FastQC (version 0.11.5)