FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15847418
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGCGT12400.08.94193690-94
CCTAAAA85400.07.3348941
TGCTAGC18250.06.706849685-89
GCTAGCG16700.06.63952185-89
ATGCTAG24300.05.214814785-89
Produced by FastQC (version 0.11.5)