FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19049160
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT95100.038.005244
AGTGGTA103300.035.0580675
AGCAGTG135500.026.9454752
GTGGTAT142450.025.7255926
GCAGTGG150550.024.2011933
TGGTATC168850.021.4048777
AAGCAGT180350.020.3982721
GGTATCA183650.019.836718
GTATCAA195650.018.8040379
TCTTGGG120250.06.41829635-39
GCAGAGT126750.06.407242315-19
CAACGCA152450.05.516015510-14
Produced by FastQC (version 0.11.5)