FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16279849
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA59650.010.8616827
ACACTAT62650.09.652198
CACTATA73900.07.8905439
CAAACAC95100.06.2829355
AAACACT114100.06.246186
Produced by FastQC (version 0.11.5)