FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12687114
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC41750.011.5514549
AGTGAGT38500.011.2829661
GTGAGTA40000.010.8018022
GAGCCCA43650.07.750549
GTATAAC91400.06.0641946
ATAACCC79350.05.9870848
CTAAGTA33352.7230271E-95.82881644
ATCTAAG32609.8625605E-95.7432892
TGAGTAT97400.05.3960763
CGAGCCC72150.05.1878258
GTGTACC69850.05.16489651
GAGTATA95000.05.0776614
TATAACC115450.05.05013047
Produced by FastQC (version 0.11.5)