FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005181696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005181696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14295589
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA82600.027.3674475
CAGTGGT88000.026.2614784
AGCAGTG110300.021.0209162
GTGGTAT116950.019.8212596
TGGTATC121400.019.0946967
GGTATCA127300.018.492348
GTATCAA129300.018.0392729
AAGCAGT146100.016.1253051
GCAGTGG148250.015.5413443
CTAGCCG8550.0086065037.5779546
TCTTGGG86150.05.816377635-39
GCAGAGT95550.05.469903515-19
GTGAGTA36802.6993803E-85.2830812
TGAGTAG33757.027811E-75.12000943
Produced by FastQC (version 0.11.5)