FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14741997
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT103700.035.478314
AGTGGTA105900.035.013225
AGCAGTG122650.030.3497812
GCAGTGG140500.026.3907473
GTGGTAT148200.025.2138946
GTATCAA173250.022.0676849
AAGCAGT181400.021.0330091
GGTATCA187650.020.3742438
TGGTATC194150.019.3577087
CAACGCA116750.07.166121510-14
GCAGAGT126800.06.541126315-19
TCTTGGG124750.06.475576435-39
AACGCAG133450.06.25855910-14
TCAACGC163200.05.53238410-14
GATCGGA159950.05.27575541
CGCAGAG171950.05.091558515-19
Produced by FastQC (version 0.11.5)