FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14741997
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTCAA123650.024.0600747
CTCAAAC152300.019.6185429
ATGGCTC165900.018.0629225
TGGCTCA184600.016.0770576
GCTCAAA191050.015.7901238
TCTGATG223550.013.15071
GATGGCT254800.011.7890184
CCTCTAG21700.011.47989450-54
CTCTAGG17900.011.34272950-54
CTCGGGT56400.010.646646520-24
CTGATGG300850.09.9138632
TCTAGGA20650.09.69273350-54
CTAGGAT22150.08.90632150-54
TGATGGC366050.08.3832363
GGGTGGG89200.07.296636625-29
AACACAG97450.07.004000710-14
GGTCCTC91800.06.948786745-49
ACACAGC100350.06.70114810-14
TCGGGTG96400.06.66203625-29
AGCGACC105700.06.57997415-19
Produced by FastQC (version 0.11.5)