FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15788530
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGGTA99850.038.9372375
CAGTGGT102750.038.118564
AGCAGTG138800.029.1525962
GTGGTAT136300.029.1055036
GCAGTGG151650.026.5394273
TGGTATC159300.024.9935977
GGTATCA163450.024.4920858
GTATCAA164950.024.4439629
AAGCAGT175600.022.9637991
TCTTGGG112950.07.470705535-39
GCAGAGT128350.06.5967215-19
CAACGCA144450.06.14084210-14
AACGCAG163050.05.528640310-14
TATCAAC177750.05.37926910-14
Produced by FastQC (version 0.11.5)