FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14888616
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGGT89550.029.265384
AGTGGTA105350.025.3546585
AGCAGTG117550.023.0299952
GCAGTGG128850.020.8421653
GTGGTAT140350.019.4422556
TGGTATC159200.017.2306547
AAGCAGT166000.016.7732831
GGTATCA167200.016.708328
GTATCAA172500.016.0697469
TCTTGGG102550.05.616616235-39
GCAGAGT109650.05.33168315-19
CTAGATC13400.05.1583953140-144
Produced by FastQC (version 0.11.5)