FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13995080
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA136350.07.0534891
TCGGAAG160750.06.18305163
AGAGCGT162000.05.99883568
AAGAGCG194650.05.4363967
GAGCGTC181350.05.35874189
ATCGGAA182550.05.24913172
Produced by FastQC (version 0.11.5)