FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005182339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005182339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15067675
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAGA16200.010.57743935-39
ACCCTAG15750.010.5139535-39
CCTAGAG19200.08.92471435-39
CTAGAGC23800.07.623285335-39
ACATACC123900.07.26275978
AACATAC134200.07.13457167
CATACCA150150.06.47292049
ACGTTAA44300.06.01603564
ACAAAAC174800.05.72929433
AAACATA188950.05.3340686
CAAAACA193150.05.3327814
CACACTA38950.05.027613610-14
Produced by FastQC (version 0.11.5)